BENDIGO V/Line trains were delayed yesterday after a track fault near Sunshine.
Trains were back to normal mid-afternoon.
A metro signal failure near Sunshine at about 8.30am delayed some Bendigo and Ballarat trains.
The 7.45am Bendigo to Melbourne train was delayed by about 26 minutes.
The spokesman said the track fault was cleared shortly after it was discovered.
“We have attended to the fault and apologise for any inconvenience,” he said.
The V/Line Bendigo Line twitter account also thanked passengers for their understanding.
"Your patience has been greatly appreciated this morning as we try to get you all where you are going as quickly as possible," the tweet said.